PacBio - SMRTLink
Long-Read Sequencing: PacBio and SMRT Link
A new PacBio Revio sequencing machine is available in the School of Medicine Genomics Core.
To run SMRTLink on Rivanna:
# check which versions are available and load the module
$ module spider SMRT
$ module load smrtlink/25.2.0
Lots of tools are available for sequence analysis and data manipulation.
For example, bam2fasta converts BAM to FASTA, and bam2fastq converts BAM to FASTQ.
