Sequence Coverage Plot

Sequence coverage plots (*_sequence_coverage.pdf) show the alignment depth along the length of the protein.

Sequence coverage plot for CB1. Darker colors indicate higher identity to the query sequence.

This example has a depth of ~13,000 sequences, with varying levels of homology to the query. The CB1 protein is a 7-transmembrane (7TM) helical protein with less-structured tails on both termini — which is also reflected in its 3D structure predictions.

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